Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | PQ457_07280 | Q2G781 | + | 1554387 - 1555742 | 47267.1 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | PQ457_07285 | Q9A354 | + | 1555742 - 1557295 | 54730.5 |
| dmt family transporter | PQ457_07290 | Q9KKU0 | - | 1557357 - 1558262 | 32286.8 |
| cpaf family protein | PQ457_07295 | P9WMT2 | - | 1558354 - 1559871 | 55743.5 |
| hnh endonuclease | PQ457_07300 | O06715 | + | 1560001 - 1560330 | 12307.7 |
| atp synthase f1 subunit epsilon | PQ457_07305 | Q2G5N4 | - | 1560431 - 1560688 | 8872.76 |
| f0f1 atp synthase subunit beta | PQ457_07310 | Q2G5N5 | - | 1560692 - 1562128 | 50678.3 |
| f0f1 atp synthase subunit gamma | PQ457_07315 | Q2G5N6 | - | 1562158 - 1563030 | 30967.4 |
| f0f1 atp synthase subunit alpha | PQ457_07320 | Q2G5N7 | - | 1563061 - 1564590 | 54575.5 |
| f0f1 atp synthase subunit delta | PQ457_07325 | Q2G5N8 | - | 1564657 - 1565211 | 18841.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.