Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | PQ457_07230 | P0AC14 | + | 1544559 - 1545644 | 38522.5 |
| sigma-54 dependent transcriptional regulator | PQ457_07235 | Q9APD9 | - | 1545866 - 1547290 | 50869.6 |
| aa3-type cytochrome c oxidase subunit iv | PQ457_07240 | Not Available | + | 1547525 - 1547650 | 4595.69 |
| nad(p) transhydrogenase subunit alpha | PQ457_07245 | Q2RSB2 | + | 1547661 - 1548791 | 38703.5 |
| proton-translocating transhydrogenase family protein | PQ457_07250 | Q2RSB3 | + | 1548804 - 1549100 | 10093.8 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | PQ457_07255 | Q2RSB4 | + | 1549157 - 1550722 | 54357.2 |
| hypothetical protein | PQ457_07260 | Not Available | + | 1550735 - 1551040 | 10895.7 |
| deoxyguanosinetriphosphate triphosphohydrolase | PQ457_07265 | Q9RNN5 | + | 1551309 - 1552469 | 42999.7 |
| glycine cleavage system aminomethyltransferase gcvt | PQ457_07270 | Q54DD3 | + | 1552825 - 1554012 | 42546.8 |
| glycine cleavage system protein gcvh | PQ457_07275 | Q98LT7 | + | 1554009 - 1554380 | 12974.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.