Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iia | PQ457_07130 | P69799 | - | 1526970 - 1527374 | 14119.2 |
| rnase adapter rapz | PQ457_07135 | Q2G484 | - | 1527466 - 1528440 | 35845.9 |
| hpr kinase/phosphatase c-terminal domain-containing protein | PQ457_07140 | Q8ENK1 | - | 1528508 - 1528960 | 15917.6 |
| atp-binding protein | PQ457_07145 | P72292 | - | 1528957 - 1530546 | 58440.2 |
| response regulator transcription factor | PQ457_07150 | P50351 | - | 1530543 - 1531298 | 28019.3 |
| hypothetical protein | PQ457_07155 | Not Available | + | 1531811 - 1532173 | 11953.1 |
| hypothetical protein | PQ457_07160 | Not Available | + | 1532176 - 1532361 | 6317.26 |
| alpha/beta hydrolase | PQ457_07165 | Q9ZD73 | - | 1532433 - 1533089 | 24098.9 |
| aminotransferase class v-fold plp-dependent enzyme | PQ457_07170 | Q07177 | + | 1533248 - 1534276 | 35926.3 |
| cysteine desulfurase family protein | PQ457_07175 | Q1RHY6 | + | 1534273 - 1535337 | 36452.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.