Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PQ457_07080 | O32238 | + | 1518758 - 1519411 | 23340.8 |
| glutathione s-transferase family protein | PQ457_07085 | P04907 | - | 1519408 - 1520052 | 23093.6 |
| cobaltochelatase subunit cobs | PQ457_07090 | P29933 | + | 1520141 - 1521133 | 36975.2 |
| trna pseudouridine(38-40) synthase trua | PQ457_07095 | Q1GWK1 | - | 1521383 - 1522129 | 27681.2 |
| methionyl-trna formyltransferase | PQ457_07100 | Q2G493 | - | 1522126 - 1523034 | 31845.7 |
| recombination mediator recr | PQ457_07105 | Q2NCT4 | + | 1523088 - 1523684 | 21459.9 |
| peptide deformylase | PQ457_07110 | Q2G491 | + | 1523746 - 1524315 | 21232.5 |
| dna recombination protein rmuc | PQ457_07115 | Q9REQ3 | + | 1524368 - 1525771 | 51912.5 |
| rna methyltransferase | PQ457_07120 | P94538 | - | 1525778 - 1526578 | 28795.8 |
| hpr family phosphocarrier protein | PQ457_07125 | P65876 | - | 1526654 - 1526932 | 9240.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.