Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ457_06980 | Not Available | + | 1499239 - 1501860 | 91378.0 |
| excinuclease abc subunit uvrc | PQ457_06985 | Q2G9G8 | + | 1501936 - 1503873 | 72179.5 |
| gnat family n-acetyltransferase | PQ457_06990 | Not Available | - | 1504087 - 1505292 | 44261.5 |
| sodium-translocating pyrophosphatase | PQ457_06995 | P60363 | - | 1505421 - 1507526 | 71170.7 |
| fatty acid desaturase | PQ457_07000 | P20388 | + | 1507806 - 1508828 | 38725.1 |
| hypothetical protein | PQ457_07005 | Not Available | + | 1508833 - 1509027 | 7372.21 |
| thiamine-phosphate kinase | PQ457_07010 | O27447 | - | 1509024 - 1509893 | 30201.6 |
| transcription antitermination factor nusb | PQ457_07015 | Q2G467 | - | 1509899 - 1510348 | 16672.8 |
| histidinol dehydrogenase | PQ457_07020 | Q9RH05 | - | 1510360 - 1511655 | 45251.6 |
| atp phosphoribosyltransferase | PQ457_07025 | Q2G469 | - | 1511652 - 1512314 | 23845.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.