Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | PQ457_06485 | P9WJA2 | - | 1427770 - 1428189 | 15270.4 |
| hypothetical protein | PQ457_06490 | Not Available | + | 1428565 - 1428783 | 8174.02 |
| hypothetical protein | PQ457_06495 | Not Available | + | 1428780 - 1429046 | 9808.92 |
| erythromycin esterase family protein | PQ457_06500 | P9WLM0 | + | 1429067 - 1430392 | 49488.3 |
| alpha/beta hydrolase | PQ457_06505 | P9WHK0 | + | 1430374 - 1431030 | 22939.0 |
| phosphoribosyltransferase | PQ457_06510 | P9WHK0 | + | 1431027 - 1431719 | 24435.7 |
| phosphoenolpyruvate synthase | PQ457_06515 | Q55905 | + | 1431716 - 1434103 | 85631.6 |
| nitroreductase | PQ457_06520 | O26223 | + | 1434109 - 1434669 | 20579.8 |
| thioesterase family protein | PQ457_06525 | F4HX80 | - | 1434969 - 1435412 | 16473.0 |
| hypothetical protein | PQ457_06530 | Not Available | - | 1435436 - 1435879 | 16259.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.