Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent alcohol dehydrogenase family protein | PQ457_06435 | P9WQC0 | - | 1410128 - 1411108 | 34424.8 |
| hsp20/alpha crystallin family protein | PQ457_06440 | Q4UKR8 | + | 1411294 - 1411788 | 18163.7 |
| universal stress protein | PQ457_06445 | P42297 | + | 1412061 - 1413068 | 36025.7 |
| glucoamylase family protein | PQ457_06450 | P20471 | + | 1413167 - 1421428 | 302368.0 |
| pas domain s-box protein | PQ457_06455 | P26489 | + | 1421668 - 1423539 | 69096.8 |
| response regulator | PQ457_06460 | P23221 | + | 1423532 - 1424191 | 24823.8 |
| helix-turn-helix domain-containing protein | PQ457_06465 | P26488 | + | 1424363 - 1425019 | 24383.8 |
| outer membrane beta-barrel protein | PQ457_06470 | P0A3U4 | + | 1425259 - 1426080 | 28069.4 |
| host attachment family protein | PQ457_06475 | Not Available | - | 1426328 - 1426780 | 16235.5 |
| hypothetical protein | PQ457_06480 | Not Available | - | 1426764 - 1427453 | 25119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.