Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase family protein | PQ457_06385 | B3EY95 | - | 1395251 - 1396762 | 54515.2 |
| ggdef domain-containing protein | PQ457_06390 | Q9KKZ4 | + | 1397179 - 1398150 | 36301.9 |
| eal domain-containing protein | PQ457_06395 | Q9ABX9 | + | 1398442 - 1400571 | 77894.0 |
| hypothetical protein | PQ457_06400 | Not Available | + | 1400828 - 1401196 | 12520.3 |
| response regulator | PQ457_06405 | Q9F8D7 | + | 1401196 - 1404015 | 100955.0 |
| diguanylate cyclase | PQ457_06410 | Q9A5I5 | + | 1404027 - 1404983 | 34942.9 |
| hypothetical protein | PQ457_06415 | Not Available | + | 1405222 - 1405683 | 16314.5 |
| cation-translocating p-type atpase | PQ457_06420 | O34431 | + | 1405761 - 1408292 | 89228.6 |
| bon domain-containing protein | PQ457_06425 | P0AFH9 | + | 1408487 - 1409137 | 23634.9 |
| universal stress protein | PQ457_06430 | P73475 | - | 1409238 - 1410044 | 29018.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.