Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_06335 | Not Available | + | 1387146 - 1387415 | 8977.13 |
| periplasmic heavy metal sensor | PQ457_06340 | P37975 | + | 1387412 - 1387861 | 15884.2 |
| sigma-70 family rna polymerase sigma factor | PQ457_06345 | P37978 | + | 1387861 - 1388436 | 20919.1 |
| glycosyltransferase | PQ457_06350 | D1BZ82 | + | 1388903 - 1390105 | 44198.3 |
| Trna-pro | Not Available | Not Available | + | 1390250 - 1390326 | Not Available |
| hypothetical protein | PQ457_06360 | Not Available | + | 1390667 - 1391206 | 18094.6 |
| Trna-met | Not Available | Not Available | + | 1391323 - 1391398 | Not Available |
| polysaccharide deacetylase family protein | PQ457_06370 | Not Available | - | 1391465 - 1392469 | 37961.5 |
| histidine kinase dimerization/phospho-acceptor domain-containing protein | PQ457_06375 | Q03228 | - | 1392496 - 1394211 | 60253.5 |
| lrp/asnc family transcriptional regulator | PQ457_06380 | P56901 | + | 1394521 - 1394988 | 17248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.