Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PQ457_06285 | Q8VQK4 | - | 1376042 - 1377028 | 34538.6 |
| abc transporter substrate-binding protein | PQ457_06290 | Q32IB6 | - | 1377025 - 1378548 | 55839.1 |
| fad-binding oxidoreductase | PQ457_06295 | P44732 | - | 1378545 - 1379771 | 43446.8 |
| haloacid dehalogenase type ii | PQ457_06300 | Q01399 | - | 1379831 - 1380499 | 24695.5 |
| glyoxylate/hydroxypyruvate reductase a | PQ457_06305 | A8GD46 | - | 1380648 - 1381601 | 33990.6 |
| pepsy-associated tm helix domain-containing protein | PQ457_06310 | Not Available | - | 1381598 - 1382575 | 34575.9 |
| tonb-dependent receptor | PQ457_06315 | Q9HUX3 | - | 1382652 - 1384778 | 76209.4 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | PQ457_06320 | Not Available | - | 1385008 - 1386183 | 43598.5 |
| hypothetical protein | PQ457_06325 | Not Available | - | 1386243 - 1386485 | 8317.08 |
| copper resistance protein copc | PQ457_06330 | Q56797 | - | 1386617 - 1387039 | 14534.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.