Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | PQ457_06235 | Q9I6J2 | - | 1364031 - 1365419 | 49619.3 |
| tartrate dehydrogenase | PQ457_06240 | P76251 | - | 1365494 - 1366561 | 38884.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | PQ457_06245 | P25526 | - | 1366567 - 1368027 | 50805.2 |
| gnat family n-acetyltransferase | PQ457_06250 | O06743 | - | 1368031 - 1368885 | 30633.9 |
| aldehyde dehydrogenase family protein | PQ457_06255 | P08157 | + | 1369124 - 1370593 | 50894.9 |
| fad-binding oxidoreductase | PQ457_06260 | Q5L2C2 | - | 1370635 - 1371771 | 40958.1 |
| nad(p)/fad-dependent oxidoreductase | PQ457_06265 | P72300 | - | 1371768 - 1373138 | 48268.1 |
| (2fe-2s)-binding protein | PQ457_06270 | Not Available | - | 1373120 - 1373458 | 11942.2 |
| abc transporter atp-binding protein | PQ457_06275 | Q57RB2 | - | 1373455 - 1375227 | 62640.1 |
| abc transporter permease | PQ457_06280 | Q6D3B2 | - | 1375224 - 1376045 | 28692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.