Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | PQ457_06085 | Q2G6X5 | + | 1337850 - 1338413 | 20669.7 |
| inositol monophosphatase family protein | PQ457_06090 | Q9A3D5 | + | 1338416 - 1339252 | 30569.2 |
| Trna-leu | Not Available | Not Available | + | 1339342 - 1339425 | Not Available |
| gnat family n-acetyltransferase | PQ457_06100 | Not Available | - | 1339476 - 1340006 | 19146.3 |
| asparaginase domain-containing protein | PQ457_06105 | Q9X7E6 | - | 1340009 - 1340953 | 30618.9 |
| hydrogenase small subunit | PQ457_06110 | P31892 | + | 1341205 - 1342314 | 40027.0 |
| nickel-dependent hydrogenase large subunit | PQ457_06115 | P18636 | + | 1342314 - 1344113 | 66521.4 |
| hupe/urej family protein | PQ457_06120 | P27650 | + | 1344126 - 1344692 | 18134.7 |
| ni/fe-hydrogenase, b-type cytochrome subunit | PQ457_06125 | P21960 | + | 1344705 - 1345424 | 27624.8 |
| hyad/hybd family hydrogenase maturation endopeptidase | PQ457_06130 | Q43954 | + | 1345663 - 1346367 | 25457.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.