Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | PQ457_06035 | P54491 | - | 1327590 - 1328162 | 20509.5 |
| cell division protein zapa | PQ457_06040 | Not Available | - | 1328509 - 1328817 | 10972.2 |
| hypothetical protein | PQ457_06045 | Not Available | - | 1328814 - 1329038 | 8159.73 |
| transketolase | PQ457_06050 | P29277 | + | 1329235 - 1331208 | 70443.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | PQ457_06055 | P09316 | + | 1331223 - 1332230 | 35811.8 |
| phosphoglycerate kinase | PQ457_06060 | Q2G6W8 | + | 1332328 - 1333527 | 41559.1 |
| class i fructose-bisphosphate aldolase | PQ457_06065 | Q9PKH8 | + | 1333665 - 1334576 | 32341.5 |
| thiamine phosphate synthase | PQ457_06070 | Q2NB00 | + | 1334657 - 1335337 | 24221.6 |
| oligopeptide transporter, opt family | PQ457_06075 | P44016 | + | 1335401 - 1337383 | 66976.5 |
| hypothetical protein | PQ457_06080 | Not Available | - | 1337394 - 1337708 | 11746.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.