Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | PQ457_05985 | Q2NBR6 | - | 1320331 - 1321143 | 28769.5 |
| eal domain-containing protein | PQ457_05990 | Q9ABX9 | - | 1321185 - 1322882 | 61995.5 |
| Trna-pro | Not Available | Not Available | + | 1323068 - 1323144 | Not Available |
| methyl-accepting chemotaxis protein | PQ457_06000 | P55652 | - | 1323306 - 1324838 | 53864.0 |
| hypothetical protein | PQ457_06005 | Not Available | - | 1324842 - 1325174 | 11202.0 |
| thymidylate synthase | PQ457_06010 | Q2G6V6 | + | 1325321 - 1326274 | 35843.6 |
| ydei/ompd-associated family protein | PQ457_06015 | Not Available | + | 1326287 - 1326889 | 21916.3 |
| Trna-asp | Not Available | Not Available | + | 1327096 - 1327172 | Not Available |
| Trna-asp | Not Available | Not Available | + | 1327207 - 1327283 | Not Available |
| duf2842 domain-containing protein | PQ457_06030 | Not Available | - | 1327375 - 1327590 | 8127.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.