Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | PQ457_05885 | Q8YHH2 | + | 1301551 - 1302297 | 25774.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | PQ457_05890 | Q9X5F2 | + | 1302298 - 1303452 | 40500.7 |
| rip metalloprotease rsep | PQ457_05895 | Q8UFL7 | + | 1303477 - 1304577 | 39658.0 |
| outer membrane protein assembly factor bama | PQ457_05900 | A8GID8 | + | 1304862 - 1307582 | 100261.0 |
| omph family outer membrane protein | PQ457_05905 | Not Available | + | 1307582 - 1308262 | 23411.0 |
| 3-hydroxyacyl-acp dehydratase fabz | PQ457_05910 | Q2G8K0 | + | 1308283 - 1308762 | 17364.2 |
| 50s ribosomal protein l31 | PQ457_05915 | Q2G8J9 | + | 1308854 - 1309087 | 8476.98 |
| Trna-his | Not Available | Not Available | + | 1309283 - 1309359 | Not Available |
| heme abc transporter permease ccmc | PQ457_05925 | P30962 | + | 1309546 - 1310304 | 27161.6 |
| hypothetical protein | PQ457_05930 | Not Available | + | 1310304 - 1310444 | 5152.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.