Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | PQ457_05785 | O66120 | + | 1283577 - 1283966 | 14146.1 |
| dihydrolipoyl dehydrogenase | PQ457_05790 | P50970 | + | 1283972 - 1285384 | 49637.1 |
| hypothetical protein | PQ457_05795 | Not Available | + | 1285500 - 1285925 | 15416.3 |
| pilz domain-containing protein | PQ457_05800 | Not Available | - | 1285927 - 1286154 | 8387.2 |
| lrgb family protein | PQ457_05805 | P42102 | - | 1286382 - 1287074 | 24307.4 |
| cida/lrga family protein | PQ457_05810 | Q81Y27 | - | 1287067 - 1287384 | 11170.3 |
| hamp domain-containing sensor histidine kinase | PQ457_05815 | Q9I0I2 | - | 1287411 - 1288751 | 48694.8 |
| response regulator transcription factor | PQ457_05820 | Q9I0I1 | - | 1288748 - 1289404 | 24295.3 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_05825 | Q44585 | + | 1289500 - 1290597 | 36669.4 |
| cusa/czca family heavy metal efflux rnd transporter | PQ457_05830 | P94177 | + | 1290601 - 1293678 | 109118.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.