Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | PQ457_05735 | Q2YMH5 | + | 1272574 - 1273950 | 48443.5 |
| cvpa family protein | PQ457_05740 | Not Available | + | 1273963 - 1274556 | 21150.8 |
| iron-sulfur cluster assembly scaffold protein | PQ457_05745 | Not Available | + | 1274558 - 1275004 | 15263.3 |
| polyhydroxyalkanoate synthesis repressor phar | PQ457_05750 | P45373 | + | 1275105 - 1275692 | 21845.3 |
| his/gly/thr/pro-type trna ligase c-terminal domain-containing protein | PQ457_05755 | Q2G6Y3 | + | 1275825 - 1277387 | 58057.7 |
| lysozyme inhibitor lpri family protein | PQ457_05760 | P42879 | + | 1277387 - 1277806 | 15935.2 |
| m20/m25/m40 family metallo-hydrolase | PQ457_05765 | E5A6Z0 | + | 1277851 - 1279167 | 46743.4 |
| vacb/rnase ii family 3'-5' exoribonuclease | PQ457_05770 | Q9KNY1 | + | 1279291 - 1281558 | 82751.7 |
| universal stress protein | PQ457_05775 | Not Available | - | 1281555 - 1282025 | 15991.3 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | PQ457_05780 | O66119 | + | 1282298 - 1283575 | 42924.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.