Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cap domain-containing protein | PQ457_05685 | Q41359 | + | 1264057 - 1264602 | 19668.6 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | PQ457_05690 | Q2RN61 | - | 1264698 - 1265318 | 22258.5 |
| ribonuclease ph | PQ457_05695 | Q2NAJ7 | - | 1265376 - 1266092 | 25371.5 |
| heat-inducible transcriptional repressor hrca | PQ457_05700 | Q2NAJ6 | + | 1266261 - 1267319 | 37017.5 |
| nucleotide exchange factor grpe | PQ457_05705 | Q2NAJ5 | + | 1267339 - 1267854 | 18802.2 |
| hypothetical protein | PQ457_05710 | Not Available | + | 1267929 - 1268189 | 8424.21 |
| copper chaperone pcu(a)c | PQ457_05715 | Q6ACU3 | - | 1268275 - 1268781 | 17073.0 |
| hypothetical protein | PQ457_05720 | Not Available | + | 1268878 - 1269192 | 11653.5 |
| molecular chaperone dnak | PQ457_05725 | Q2G6N0 | + | 1269185 - 1271089 | 67933.6 |
| molecular chaperone dnaj | PQ457_05730 | Q5NPS5 | + | 1271150 - 1272283 | 40877.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.