Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfa family protein | PQ457_05635 | Not Available | - | 1253838 - 1254248 | 14373.3 |
| acyltransferase | PQ457_05640 | P29113 | - | 1254250 - 1255326 | 39894.5 |
| dna topoisomerase iv subunit b | PQ457_05645 | O54479 | - | 1255326 - 1257323 | 73363.5 |
| penicillin-binding protein activator | PQ457_05650 | Q9ZCJ2 | - | 1257390 - 1258553 | 40400.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | PQ457_05655 | Q2NAK3 | + | 1258605 - 1259432 | 29679.1 |
| yran family protein | PQ457_05660 | Q2NAK2 | + | 1259443 - 1259814 | 14069.1 |
| glutathione synthase | PQ457_05665 | P61396 | + | 1259863 - 1260876 | 36545.9 |
| acyltransferase | PQ457_05670 | Q00718 | + | 1260880 - 1261950 | 39204.6 |
| tyrosine recombinase xerc | PQ457_05675 | B8I9N8 | - | 1261947 - 1262867 | 33271.1 |
| radical sam family heme chaperone hemw | PQ457_05680 | Q5SUV1 | - | 1262864 - 1264012 | 41119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.