Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | PQ457_05585 | Q8FCT3 | + | 1245050 - 1245793 | 26109.2 |
| phosphoribosyl-amp cyclohydrolase | PQ457_05590 | Q2NAM2 | + | 1246158 - 1246529 | 13760.4 |
| dienelactone hydrolase family protein | PQ457_05595 | Q09571 | - | 1246530 - 1247231 | 24819.5 |
| mfs transporter | PQ457_05600 | A8AJL6 | - | 1247234 - 1248484 | 44244.2 |
| pilz domain-containing protein | PQ457_05605 | Not Available | - | 1248584 - 1248916 | 12501.2 |
| tyrosine--trna ligase | PQ457_05610 | Q2G6I4 | - | 1249039 - 1250268 | 44572.5 |
| domon-like domain-containing protein | PQ457_05615 | Not Available | + | 1250308 - 1250862 | 19901.8 |
| duf1343 domain-containing protein | PQ457_05620 | P40407 | + | 1250859 - 1252082 | 44906.8 |
| integrase core domain-containing protein | PQ457_05625 | Not Available | - | 1252076 - 1252985 | 31629.0 |
| glutathione s-transferase family protein | PQ457_05630 | P30347 | + | 1253035 - 1253775 | 28421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.