Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | PQ457_05535 | Q7VMI2 | - | 1232541 - 1233641 | 39316.7 |
| pep-cterm sorting domain-containing protein | PQ457_05540 | Not Available | - | 1233785 - 1234960 | 36677.8 |
| aminoacyl-trna hydrolase | PQ457_05545 | Q2G6G8 | - | 1235142 - 1235708 | 20815.3 |
| integrase core domain-containing protein | PQ457_05550 | Q2G6G9 | - | 1235817 - 1236104 | 10542.6 |
| trab/gumn family protein | PQ457_05555 | Not Available | - | 1236232 - 1237107 | 30664.5 |
| trab/gumn family protein | PQ457_05560 | P77301 | - | 1237104 - 1238018 | 32669.7 |
| glycine--trna ligase subunit alpha | PQ457_05565 | A5VFX8 | + | 1238220 - 1239134 | 34555.9 |
| glycine--trna ligase subunit beta | PQ457_05570 | B1M1W2 | + | 1239131 - 1241260 | 75741.4 |
| pyruvate, phosphate dikinase | PQ457_05575 | Q59754 | + | 1241311 - 1243974 | 95527.2 |
| methyltransferase domain-containing protein | PQ457_05580 | O80543 | - | 1244199 - 1244966 | 27253.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.