Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | + | 1222595 - 1222670 | Not Available |
| rod shape-determining protein roda | PQ457_05490 | P0ABG8 | - | 1222789 - 1223907 | 40316.7 |
| penicillin-binding protein 2 | PQ457_05495 | P44469 | - | 1223904 - 1225994 | 75571.5 |
| rod shape-determining protein mred | PQ457_05500 | Not Available | - | 1225994 - 1226539 | 19586.9 |
| rod shape-determining protein mrec | PQ457_05505 | B8H610 | - | 1226540 - 1227523 | 33310.0 |
| rod shape-determining protein | PQ457_05510 | A0A0H3C7V4 | - | 1227616 - 1228662 | 37020.0 |
| hypothetical protein | PQ457_05515 | Not Available | + | 1228637 - 1228819 | 6858.29 |
| dna mismatch repair endonuclease mutl | PQ457_05520 | A5V3J3 | + | 1228953 - 1230791 | 65332.5 |
| ectonucleotide pyrophosphatase/phosphodiesterase | PQ457_05525 | O94323 | - | 1230795 - 1232024 | 44730.8 |
| maoc family dehydratase | PQ457_05530 | P96670 | - | 1232062 - 1232541 | 18171.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.