Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_05435 | Not Available | - | 1214215 - 1214748 | 18205.4 |
| phosphopyruvate hydratase | PQ457_05440 | Q2G662 | + | 1214920 - 1216206 | 45168.7 |
| marr family winged helix-turn-helix transcriptional regulator | PQ457_05445 | Not Available | - | 1216284 - 1216811 | 19269.9 |
| hypothetical protein | PQ457_05450 | Not Available | - | 1216926 - 1217090 | 5976.94 |
| m13 family metallopeptidase | PQ457_05455 | O52071 | + | 1217418 - 1219505 | 75386.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | PQ457_05460 | Q2G669 | - | 1219564 - 1219986 | 14622.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | PQ457_05465 | O66679 | - | 1220001 - 1221284 | 46790.0 |
| acyltransferase | PQ457_05470 | P29113 | - | 1221328 - 1222332 | 37679.7 |
| Trna-lys | Not Available | Not Available | + | 1222388 - 1222463 | Not Available |
| Trna-lys | Not Available | Not Available | + | 1222493 - 1222568 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.