Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase b | PQ457_05385 | P37351 | - | 1202658 - 1203095 | 15108.0 |
| rna polymerase sigma factor rpod | PQ457_05390 | Q59753 | - | 1203312 - 1205345 | 77055.0 |
| dna primase | PQ457_05395 | P0ABS6 | - | 1205358 - 1207265 | 69557.4 |
| gatb/yqey domain-containing protein | PQ457_05400 | P54464 | - | 1207265 - 1207717 | 15924.5 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | PQ457_05405 | O50235 | + | 1207875 - 1209041 | 41095.2 |
| carbamoyl-phosphate synthase large subunit | PQ457_05410 | O50236 | + | 1209041 - 1212355 | 118472.0 |
| transcription elongation factor grea | PQ457_05415 | Q2G656 | + | 1212472 - 1212948 | 17596.0 |
| duf4170 domain-containing protein | PQ457_05420 | Not Available | - | 1213048 - 1213269 | 8153.71 |
| hypothetical protein | PQ457_05425 | Not Available | - | 1213389 - 1213763 | 13416.4 |
| phage holin family protein | PQ457_05430 | Not Available | - | 1213760 - 1214134 | 13384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.