Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_05335 | Not Available | + | 1194910 - 1195368 | 16073.5 |
| tsup family transporter | PQ457_05340 | P29942 | - | 1195384 - 1196139 | 26120.7 |
| subclass b3 metallo-beta-lactamase | PQ457_05345 | P52700 | - | 1196136 - 1197053 | 32374.6 |
| trna guanosine(34) transglycosylase tgt | PQ457_05350 | Q2G639 | + | 1197140 - 1198264 | 41146.4 |
| hypothetical protein | PQ457_05355 | Not Available | + | 1198342 - 1198911 | 21169.8 |
| hypothetical protein | PQ457_05360 | Not Available | - | 1198912 - 1199106 | 7103.61 |
| 30s ribosomal protein s4 | PQ457_05365 | Q2G641 | - | 1199276 - 1199887 | 23171.9 |
| rna methyltransferase | PQ457_05370 | A0A0H2ZF87 | - | 1200100 - 1200873 | 27811.6 |
| transcriptional regulator nrdr | PQ457_05375 | Q2G644 | - | 1200870 - 1201334 | 17584.8 |
| serine hydroxymethyltransferase | PQ457_05380 | A1B0I7 | - | 1201338 - 1202636 | 46370.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.