Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase small subunit | PQ457_05285 | O28555 | - | 1184269 - 1184784 | 18870.9 |
| biosynthetic-type acetolactate synthase large subunit | PQ457_05290 | P37251 | - | 1184802 - 1186544 | 62788.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | PQ457_05295 | Q2NAU5 | - | 1186790 - 1187758 | 34606.3 |
| phosphoserine phosphatase serb | PQ457_05300 | Q9S281 | + | 1187880 - 1188626 | 26055.4 |
| phosphoribosylformylglycinamidine synthase subunit purl | PQ457_05305 | Q2G630 | - | 1188878 - 1191031 | 75739.7 |
| exodeoxyribonuclease vii small subunit | PQ457_05310 | Q2G632 | + | 1191160 - 1191417 | 9207.8 |
| polyprenyl synthetase family protein | PQ457_05315 | P22939 | + | 1191434 - 1192336 | 31915.4 |
| pantetheine-phosphate adenylyltransferase | PQ457_05320 | Q1GR20 | + | 1192409 - 1192945 | 19258.6 |
| peptidylprolyl isomerase | PQ457_05325 | Q8YHB5 | + | 1193058 - 1193774 | 25706.9 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | PQ457_05330 | Q2G636 | + | 1193782 - 1194816 | 37685.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.