Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_05235 | Not Available | + | 1173266 - 1174384 | 41912.0 |
| cytochrome p450 | PQ457_05240 | C9K1X6 | + | 1174377 - 1175750 | 51098.2 |
| pilz domain-containing protein | PQ457_05245 | Not Available | - | 1175751 - 1176164 | 15402.3 |
| septum formation initiator family protein | PQ457_05250 | Not Available | + | 1176385 - 1176669 | 10529.0 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | PQ457_05255 | O66112 | + | 1176812 - 1177876 | 38940.0 |
| pyruvate dehydrogenase complex e1 component subunit beta | PQ457_05260 | O66113 | + | 1177878 - 1179218 | 47214.8 |
| 2-isopropylmalate synthase | PQ457_05265 | Q48LY5 | - | 1179411 - 1181087 | 61175.4 |
| tmem175 family protein | PQ457_05270 | A0A086F3E3 | - | 1181290 - 1181907 | 22753.0 |
| glycosyltransferase | PQ457_05275 | Q9R9N1 | - | 1181904 - 1183022 | 40536.8 |
| ketol-acid reductoisomerase | PQ457_05280 | Q2G623 | - | 1183097 - 1184116 | 36270.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.