Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PQ457_05185 | P0C0Z0 | - | 1162542 - 1163846 | 46762.2 |
| surf1 family protein | PQ457_05190 | A8Y2C9 | - | 1163859 - 1164584 | 26644.7 |
| cytochrome o ubiquinol oxidase subunit iv | PQ457_05195 | P0ABJ7 | - | 1164584 - 1164943 | 12923.2 |
| cytochrome o ubiquinol oxidase subunit iii | PQ457_05200 | Q9WWR3 | - | 1164943 - 1165557 | 22720.9 |
| cytochrome o ubiquinol oxidase subunit i | PQ457_05205 | P0ABJ0 | - | 1165557 - 1167575 | 74829.4 |
| ubiquinol oxidase subunit ii | PQ457_05210 | Q9I427 | - | 1167588 - 1168760 | 41978.0 |
| mfs transporter | PQ457_05215 | P37643 | + | 1168990 - 1170342 | 47491.1 |
| duf4118 domain-containing protein | PQ457_05220 | P21865 | + | 1170412 - 1172037 | 58340.5 |
| response regulator transcription factor | PQ457_05225 | P21866 | + | 1172046 - 1172738 | 25168.7 |
| hypothetical protein | PQ457_05230 | Not Available | - | 1172983 - 1173267 | 11099.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.