Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | PQ457_05135 | P37631 | + | 1150167 - 1151378 | 42489.0 |
| alcohol dehydrogenase adhp | PQ457_05140 | O31186 | + | 1151465 - 1152490 | 35522.1 |
| hypothetical protein | PQ457_05145 | Not Available | + | 1152604 - 1153686 | 39483.6 |
| sdr family nad(p)-dependent oxidoreductase | PQ457_05150 | Q01198 | + | 1153795 - 1154703 | 31527.8 |
| cora family divalent cation transporter | PQ457_05155 | Q0T3Y9 | - | 1154714 - 1155718 | 37105.7 |
| tetr family transcriptional regulator | PQ457_05160 | P51561 | - | 1155700 - 1156293 | 21881.5 |
| tonb-dependent receptor plug domain-containing protein | PQ457_05165 | Not Available | + | 1156503 - 1158938 | 87254.1 |
| glycerophosphodiester phosphodiesterase | PQ457_05170 | Q9SD81 | + | 1158942 - 1160081 | 41091.1 |
| phosphomannomutase | PQ457_05175 | P26405 | + | 1160251 - 1161753 | 52179.5 |
| response regulator transcription factor | PQ457_05180 | A6UEL7 | - | 1162009 - 1162545 | 19799.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.