Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_05035 | Not Available | - | 1125629 - 1125799 | 5619.0 |
| error-prone dna polymerase | PQ457_05040 | Q57FU7 | - | 1125762 - 1128935 | 117796.0 |
| dna polymerase y family protein | PQ457_05045 | Q9A3J2 | - | 1128932 - 1130398 | 53256.3 |
| hypothetical protein | PQ457_05050 | Not Available | - | 1130412 - 1131188 | 26617.0 |
| hypothetical protein | PQ457_05055 | Not Available | + | 1131361 - 1132206 | 30148.1 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_05060 | Q57500 | + | 1132199 - 1133386 | 41885.0 |
| glucan biosynthesis protein | PQ457_05065 | Q8XT53 | + | 1133443 - 1134882 | 52016.6 |
| glucans biosynthesis glucosyltransferase mdoh | PQ457_05070 | Q8PPR7 | + | 1134930 - 1136660 | 62790.0 |
| rida family protein | PQ457_05075 | Q8U308 | - | 1136711 - 1137208 | 16913.6 |
| apc family permease | PQ457_05080 | Q28I80 | - | 1137282 - 1138601 | 45733.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.