Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mcp four helix bundle domain-containing protein | PQ457_04985 | O32239 | + | 1110855 - 1112543 | 59771.7 |
| chemotaxis protein chew | PQ457_04990 | P39802 | + | 1112540 - 1113037 | 18122.2 |
| chemotaxis protein cher | PQ457_04995 | Q2KCH9 | + | 1113157 - 1113912 | 28582.6 |
| chemotaxis response regulator protein-glutamate methylesterase | PQ457_05000 | Q1MC14 | + | 1113916 - 1114986 | 37964.2 |
| chemotaxis protein | PQ457_05005 | Q88IY8 | + | 1114997 - 1116769 | 63467.4 |
| efflux transporter outer membrane subunit | PQ457_05010 | Q51397 | - | 1116773 - 1118176 | 49214.4 |
| efflux rnd transporter periplasmic adaptor subunit | PQ457_05015 | Q7N3E3 | - | 1118160 - 1119317 | 40248.7 |
| efflux rnd transporter permease subunit | PQ457_05020 | P25197 | - | 1119310 - 1122501 | 112566.0 |
| hamp domain-containing sensor histidine kinase | PQ457_05025 | A0R3I7 | - | 1123530 - 1124900 | 49159.9 |
| response regulator transcription factor | PQ457_05030 | P0A5Z7 | - | 1124903 - 1125580 | 25342.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.