Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | PQ457_04935 | P94438 | + | 1099135 - 1100745 | 57468.1 |
| response regulator transcription factor | PQ457_04940 | P44845 | + | 1100742 - 1101371 | 21966.7 |
| pqq-binding-like beta-propeller repeat protein | PQ457_04945 | Not Available | + | 1101505 - 1102530 | 34263.4 |
| phosphatase pap2 family protein | PQ457_04950 | P28581 | + | 1102545 - 1103270 | 25891.4 |
| atp-binding protein | PQ457_04955 | P0C0F6 | + | 1103539 - 1105347 | 64758.4 |
| eal domain-containing protein | PQ457_04960 | Q9I310 | + | 1105344 - 1107542 | 80820.7 |
| stas domain-containing protein | PQ457_04965 | Not Available | + | 1107708 - 1108016 | 11045.3 |
| response regulator | PQ457_04970 | Q8D0P1 | + | 1108013 - 1108381 | 12974.9 |
| chemotaxis protein chea | PQ457_04975 | P09384 | + | 1108378 - 1110354 | 70603.1 |
| chemotaxis protein chew | PQ457_04980 | P21821 | + | 1110351 - 1110824 | 16821.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.