Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxylesterase family protein | PQ457_04885 | D2D3B6 | - | 1084877 - 1086484 | 57517.2 |
| tonb-dependent receptor | PQ457_04890 | Q93SE0 | - | 1086592 - 1089534 | 103188.0 |
| lysr family transcriptional regulator | PQ457_04895 | P23720 | + | 1089942 - 1090850 | 33813.2 |
| alkaline phosphatase d family protein | PQ457_04900 | Q8KRU5 | - | 1090951 - 1092477 | 55930.2 |
| hypothetical protein | PQ457_04905 | Not Available | - | 1092503 - 1092739 | 7733.27 |
| hypothetical protein | PQ457_04910 | Not Available | - | 1093085 - 1093264 | 6328.5 |
| hypothetical protein | PQ457_04915 | Not Available | - | 1093500 - 1093934 | 15031.5 |
| hypothetical protein | PQ457_04920 | Not Available | + | 1094028 - 1095998 | 71039.1 |
| hypothetical protein | PQ457_04925 | Not Available | - | 1096015 - 1096284 | 9459.97 |
| tonb-dependent receptor | PQ457_04930 | Q8X7W7 | - | 1096498 - 1098828 | 84002.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.