Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ457_04835 | Q8XBK9 | - | 1073007 - 1073912 | 33089.7 |
| aldehyde dehydrogenase family protein | PQ457_04840 | H8ZPX2 | + | 1074025 - 1075464 | 50580.9 |
| abc transporter substrate-binding protein | PQ457_04845 | Q8X6V9 | + | 1075461 - 1077029 | 57647.8 |
| dsd1 family plp-dependent enzyme | PQ457_04850 | B2DFG5 | + | 1077246 - 1078328 | 38161.9 |
| rida family protein | PQ457_04855 | Q8U308 | + | 1078328 - 1078720 | 14081.9 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | PQ457_04860 | Not Available | + | 1078816 - 1079934 | 42055.5 |
| fad-binding oxidoreductase | PQ457_04865 | Q9UL12 | + | 1079996 - 1081294 | 46230.5 |
| helix-turn-helix domain-containing gnat family n-acetyltransferase | PQ457_04870 | O31443 | + | 1081570 - 1082496 | 34566.5 |
| aspartate/glutamate racemase family protein | PQ457_04875 | A0A0H3JGH6 | + | 1082540 - 1083208 | 23363.0 |
| sulfatase-like hydrolase/transferase | PQ457_04880 | T2KPK5 | - | 1083298 - 1084854 | 57467.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.