Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tim barrel protein | PQ457_04785 | Not Available | + | 1060272 - 1061180 | 34221.5 |
| duf6379 domain-containing protein | PQ457_04790 | Not Available | + | 1061220 - 1061624 | 14949.2 |
| duf1080 domain-containing protein | PQ457_04795 | Not Available | - | 1061795 - 1062637 | 31028.7 |
| tetr/acrr family transcriptional regulator | PQ457_04800 | Q6NH62 | + | 1062906 - 1063550 | 23350.2 |
| d-lactate dehydrogenase | PQ457_04805 | P06149 | - | 1063598 - 1065292 | 62054.8 |
| sdr family oxidoreductase | PQ457_04810 | Q5HGK2 | - | 1065303 - 1066094 | 27377.6 |
| sdr family oxidoreductase | PQ457_04815 | Q561X9 | - | 1066091 - 1066822 | 24935.0 |
| fumarylacetoacetate hydrolase family protein | PQ457_04820 | Q0B628 | - | 1066834 - 1067688 | 30732.9 |
| glycosyl hydrolase | PQ457_04825 | T2KNA8 | + | 1068142 - 1071591 | 123622.0 |
| mfs transporter | PQ457_04830 | A0R5K5 | + | 1071654 - 1072859 | 41793.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.