Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_04735 | P15848 | + | 1048725 - 1048958 | 8494.42 |
| hypothetical protein | PQ457_04740 | Not Available | + | 1049115 - 1050413 | 45889.5 |
| hydrogen peroxide-inducible genes activator | PQ457_04745 | P0ACQ6 | - | 1050516 - 1051433 | 33636.0 |
| hypothetical protein | PQ457_04750 | Not Available | + | 1051575 - 1051811 | 8632.37 |
| response regulator | PQ457_04755 | Q4ZSY3 | + | 1051839 - 1052195 | 12872.5 |
| hypothetical protein | PQ457_04760 | Not Available | + | 1052240 - 1052776 | 17672.3 |
| duf389 domain-containing protein | PQ457_04765 | Q58091 | - | 1053085 - 1054644 | 54017.1 |
| sodium:proton antiporter | PQ457_04770 | G3XD29 | - | 1054641 - 1055921 | 44601.2 |
| tonb-dependent receptor | PQ457_04775 | P46359 | + | 1056382 - 1058724 | 83015.7 |
| gfo/idh/moca family oxidoreductase | PQ457_04780 | O68965 | - | 1058807 - 1060015 | 42069.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.