Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ457_04685 | Not Available | + | 1035853 - 1036659 | 29161.7 |
| abc transporter substrate-binding protein | PQ457_04690 | Not Available | - | 1036660 - 1037817 | 42205.0 |
| response regulator transcription factor | PQ457_04695 | Q9CD68 | + | 1037886 - 1038554 | 24536.8 |
| sensor histidine kinase | PQ457_04700 | Q9HV31 | + | 1038551 - 1039951 | 50428.4 |
| 2-hydroxycarboxylate transporter family protein | PQ457_04705 | P94363 | + | 1040104 - 1041462 | 47344.9 |
| tonb-dependent receptor | PQ457_04710 | Q47162 | + | 1041679 - 1043985 | 82276.9 |
| pepsy-associated tm helix domain-containing protein | PQ457_04715 | Not Available | + | 1044014 - 1045159 | 41455.0 |
| hypothetical protein | PQ457_04720 | Not Available | - | 1045252 - 1045638 | 13937.4 |
| marr family winged helix-turn-helix transcriptional regulator | PQ457_04725 | O33817 | - | 1045694 - 1046146 | 16083.4 |
| tonb-dependent receptor | PQ457_04730 | P0C2M9 | + | 1046355 - 1048721 | 83521.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.