Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | PQ457_04585 | Q2G5F4 | + | 1011585 - 1011854 | 10045.3 |
| polyribonucleotide nucleotidyltransferase | PQ457_04590 | Q2G5F5 | + | 1012136 - 1014445 | 83414.0 |
| ggdef domain-containing protein | PQ457_04595 | Q9HT84 | - | 1014559 - 1015746 | 44018.8 |
| hypothetical protein | PQ457_04600 | Not Available | - | 1015818 - 1017569 | 64646.8 |
| gcra family cell cycle regulator | PQ457_04605 | Not Available | - | 1017677 - 1018375 | 24348.1 |
| abc transporter permease | PQ457_04610 | P0AFN8 | + | 1018487 - 1019380 | 31919.8 |
| heat shock protein hspq | PQ457_04615 | C6DKX0 | - | 1019459 - 1019839 | 14624.8 |
| Trna-ser | Not Available | Not Available | + | 1019994 - 1020083 | Not Available |
| hypothetical protein | PQ457_04625 | Not Available | + | 1020856 - 1021590 | 27588.5 |
| hypothetical protein | PQ457_04630 | Not Available | + | 1021738 - 1022145 | 15663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.