Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium humi R1-4
Accession NumberCP117417.1
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose pyrophosphatase | PQ457_04435 | A7ML00 | + | 986404 - 986964 | 20421.6 |
| indole-3-glycerol phosphate synthase trpc | PQ457_04440 | Q2G6R0 | - | 986961 - 987749 | 27908.6 |
| anthranilate phosphoribosyltransferase | PQ457_04445 | Q2G6R1 | - | 987746 - 988741 | 34239.8 |
| aminodeoxychorismate/anthranilate synthase component ii | PQ457_04450 | P26922 | - | 988738 - 989331 | 20878.0 |
| chorismate-binding protein | PQ457_04455 | P95646 | - | 989328 - 990869 | 55292.3 |
| peptidyl-prolyl cis-trans isomerase | PQ457_04460 | P0ADY2 | - | 990896 - 992821 | 66606.8 |
| triose-phosphate isomerase | PQ457_04465 | Q1GIL9 | + | 993109 - 993861 | 25295.1 |
| preprotein translocase subunit secg | PQ457_04470 | Q1RGT7 | + | 993989 - 994330 | 10988.6 |
| ctp synthase | PQ457_04475 | Q2G6R7 | + | 994509 - 996140 | 59720.3 |
| yban family protein | PQ457_04480 | P0AAR6 | - | 996374 - 996724 | 13082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.