Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aquaticum |
| Strain | A212-S19-A16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aquaticum A212-S19-A16
Accession NumberCP086253.1
Gene Summary
Adenine Count
1087875 bp
Thymine Count
1088692 bp
Guanine Count
1148674 bp
Cytosine Count
1139184 bp
Genome Length
4464425 bp
Protein-coding Genes
3959 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | DMB82_0019625 | P0AC77 | + | 4230548 - 4231825 | 47874.6 |
| pantetheine-phosphate adenylyltransferase | DMB82_0019630 | C6DIB6 | + | 4231865 - 4232353 | 17853.6 |
| glycosyltransferase | DMB82_0019635 | P11290 | - | 4232359 - 4233348 | 37575.2 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | DMB82_0019640 | C6DIB8 | - | 4233405 - 4234214 | 30231.3 |
| hypothetical protein | DMB82_0019645 | Not Available | - | 4234240 - 4235613 | 51691.0 |
| 50s ribosomal protein l33 | DMB82_0019650 | Q6DAV5 | - | 4235751 - 4235918 | 6357.91 |
| 50s ribosomal protein l28 | DMB82_0019655 | C6DIC0 | - | 4235930 - 4236166 | 8946.97 |
| dna repair protein radc | DMB82_0019660 | C6DIC1 | - | 4236404 - 4237069 | 24873.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DMB82_0019665 | P0ABQ1 | + | 4237255 - 4238499 | 44161.4 |
| dutp diphosphatase | DMB82_0019670 | Q6DAV9 | + | 4238477 - 4238935 | 16206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.