Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aquaticum |
| Strain | A212-S19-A16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aquaticum A212-S19-A16
Accession NumberCP086253.1
Gene Summary
Adenine Count
1087875 bp
Thymine Count
1088692 bp
Guanine Count
1148674 bp
Cytosine Count
1139184 bp
Genome Length
4464425 bp
Protein-coding Genes
3959 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-ala-d/l-glu epimerase | DMB82_0006975 | P51981 | - | 1482239 - 1483219 | 35838.0 |
| alanine transaminase | DMB82_0006980 | P77434 | + | 1483589 - 1484830 | 45955.5 |
| type ii secretion system pilot lipoprotein gsps | DMB82_0006985 | Q01567 | + | 1484952 - 1485383 | 15209.2 |
| type ii secretion system assembly factor gspb | DMB82_0006990 | Q01563 | - | 1485380 - 1485949 | 20490.8 |
| polysaccharide lyase family 1 protein | DMB82_0006995 | P39116 | + | 1486473 - 1488041 | 56931.1 |
| glycoside hydrolase family 28 protein | DMB82_0007000 | P15922 | + | 1488180 - 1490159 | 71917.1 |
| type ii secretion system protein gspc | DMB82_0007005 | P31699 | + | 1490210 - 1491088 | 31788.7 |
| type ii secretion system secretin gspd | DMB82_0007010 | P31701 | + | 1491177 - 1493129 | 70350.8 |
| type ii secretion system atpase gspe | DMB82_0007015 | P31703 | + | 1493126 - 1494622 | 55368.1 |
| type ii secretion system inner membrane protein gspf | DMB82_0007020 | P31705 | + | 1494624 - 1495850 | 45155.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.