Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | NQ490_04090 | P37571 | - | 801928 - 804231 | 84677.5 |
| cvpa family protein | NQ490_04095 | Not Available | - | 804346 - 805008 | 23445.1 |
| duf5711 family protein | NQ490_04100 | Not Available | - | 805031 - 806374 | 48769.5 |
| trna pseudouridine(38-40) synthase trua | NQ490_04105 | Q8R7Y7 | - | 806405 - 807154 | 27001.4 |
| energy-coupling factor transporter transmembrane protein ecft | NQ490_04110 | D2RNY0 | - | 807151 - 807972 | 30248.5 |
| energy-coupling factor transporter atpase | NQ490_04115 | Q8R7Y5 | - | 807973 - 808848 | 31972.8 |
| energy-coupling factor transporter atpase | NQ490_04120 | Q18CJ0 | - | 808925 - 809770 | 31358.9 |
| class i sam-dependent methyltransferase | NQ490_04125 | Q15UB5 | - | 809773 - 810636 | 32025.0 |
| phosphoglucosamine mutase | NQ490_04130 | A3DEL6 | - | 810653 - 812023 | 48932.8 |
| holliday junction branch migration dna helicase ruvb | NQ490_04135 | A5D3G1 | - | 812104 - 813156 | 38624.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.