Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor | NQ490_09330 | P33086 | + | 1972682 - 1973107 | 16043.1 |
| is110 family transposase | NQ490_09335 | P19834 | - | 1973247 - 1974428 | 44132.7 |
| hypothetical protein | NQ490_09340 | Not Available | + | 1974677 - 1974976 | 10399.9 |
| metal abc transporter substrate-binding protein | NQ490_09345 | O05703 | + | 1975077 - 1976063 | 34674.3 |
| abc transporter atp-binding protein | NQ490_09350 | P96117 | + | 1976063 - 1976770 | 25483.9 |
| metal abc transporter permease | NQ490_09355 | Q9KD29 | + | 1976767 - 1977606 | 29006.8 |
| hypothetical protein | NQ490_09360 | Not Available | + | 1977603 - 1978109 | 17391.7 |
| gaf domain-containing protein | NQ490_09365 | Not Available | + | 1979491 - 1980090 | 22197.0 |
| is200/is605 family transposase | NQ490_09370 | Not Available | - | 1980029 - 1980261 | 7853.47 |
| hypothetical protein | NQ490_09375 | Not Available | + | 1980153 - 1981004 | 32300.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.