Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_08580 | Not Available | - | 1797724 - 1798041 | 11814.0 |
| hypothetical protein | NQ490_08585 | Not Available | - | 1798038 - 1799210 | 43304.0 |
| tyrosine-type recombinase/integrase | NQ490_08590 | P62904 | - | 1799140 - 1800213 | 41766.4 |
| abc transporter permease | NQ490_08595 | P24138 | + | 1800763 - 1801680 | 33087.9 |
| abc transporter permease | NQ490_08600 | P24139 | + | 1801695 - 1802744 | 38467.0 |
| abc transporter atp-binding protein | NQ490_08605 | P24136 | + | 1802766 - 1803767 | 37335.5 |
| abc transporter atp-binding protein | NQ490_08610 | C0SP98 | + | 1803764 - 1804762 | 36960.5 |
| peptide abc transporter substrate-binding protein | NQ490_08615 | P06202 | + | 1804953 - 1806677 | 61964.3 |
| ornithine carbamoyltransferase | NQ490_08620 | Q73P70 | - | 1806878 - 1807873 | 36246.6 |
| dna polymerase iv | NQ490_08625 | Q97MB3 | + | 1807991 - 1809238 | 46151.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.