Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | NQ490_08480 | Not Available | - | 1765424 - 1766395 | 36275.3 |
| type iv secretory system conjugative dna transfer family protein | NQ490_08485 | Not Available | - | 1766458 - 1768326 | 68871.7 |
| yodl domain-containing protein | NQ490_08490 | Q71TF8 | - | 1768340 - 1776574 | 309933.0 |
| tnpv protein | NQ490_08495 | Not Available | - | 1776659 - 1777360 | 26424.7 |
| relaxase mobl | NQ490_08500 | Not Available | - | 1777561 - 1778874 | 49995.9 |
| hypothetical protein | NQ490_08505 | Not Available | - | 1778985 - 1779395 | 15825.9 |
| m23 family metallopeptidase | NQ490_08510 | P44693 | - | 1779719 - 1781032 | 47935.3 |
| duf87 domain-containing protein | NQ490_08515 | Q6F059 | - | 1781032 - 1783368 | 89298.0 |
| duf6045 family protein | NQ490_08520 | Not Available | - | 1783773 - 1784633 | 31119.8 |
| hypothetical protein | NQ490_08525 | Not Available | - | 1784711 - 1784986 | 9977.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.