Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ490_08430 | Not Available | + | 1756996 - 1757868 | 29610.5 |
| hypothetical protein | NQ490_08435 | Not Available | + | 1757881 - 1758348 | 16428.3 |
| glycoside hydrolase family 25 protein | NQ490_08440 | P25310 | + | 1758364 - 1759251 | 32172.8 |
| phage holin family protein | NQ490_08445 | Not Available | + | 1759266 - 1759709 | 15397.0 |
| hypothetical protein | NQ490_08450 | Not Available | + | 1759898 - 1761115 | 45973.8 |
| phospho-sugar mutase | NQ490_08455 | P18159 | - | 1761182 - 1762855 | 60068.3 |
| Trna-arg | Not Available | Not Available | + | 1763044 - 1763120 | Not Available |
| type ii toxin-antitoxin system yafq family toxin | NQ490_08465 | Q47149 | - | 1763769 - 1764041 | 10630.9 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | NQ490_08470 | Q47150 | - | 1764028 - 1764300 | 10071.0 |
| hypothetical protein | NQ490_08475 | Not Available | - | 1764543 - 1765388 | 31679.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.