Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | NQ490_08030 | P19834 | - | 1681874 - 1683055 | 44132.7 |
| hypothetical protein | NQ490_08035 | Not Available | + | 1683307 - 1683825 | 19756.7 |
| Trna-ser | Not Available | Not Available | + | 1684085 - 1684176 | Not Available |
| zeta toxin family protein | NQ490_08045 | P44173 | + | 1684253 - 1684813 | 20402.1 |
| is200/is605 family transposase | NQ490_08050 | Q8R890 | - | 1684826 - 1685017 | 7101.44 |
| para family protein | NQ490_08055 | P37522 | + | 1685319 - 1686140 | 29656.3 |
| parb/repb/spo0j family partition protein | NQ490_08060 | Q72H91 | + | 1686097 - 1686984 | 33793.5 |
| relaxase/mobilization nuclease domain-containing protein | NQ490_08065 | P03865 | - | 1687163 - 1688518 | 52485.7 |
| hypothetical protein | NQ490_08070 | Not Available | - | 1688546 - 1688815 | 9817.88 |
| helicase repa family protein | NQ490_08075 | P20356 | - | 1688812 - 1690026 | 43854.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.