Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| smc family atpase | NQ490_07980 | Q9KM67 | + | 1672012 - 1674507 | 89732.0 |
| ornithine decarboxylase | NQ490_07985 | P37536 | + | 1674976 - 1676373 | 48472.7 |
| rhomboid family intramembrane serine protease | NQ490_07990 | Not Available | + | 1676467 - 1677126 | 25603.6 |
| cyclic-di-amp receptor | NQ490_07995 | P37538 | + | 1677162 - 1677485 | 11668.5 |
| hypothetical protein | NQ490_08000 | P63976 | + | 1677485 - 1678399 | 32148.8 |
| stage 0 sporulation family protein | NQ490_08005 | P37541 | + | 1678418 - 1679257 | 31417.1 |
| 4fe-4s binding protein | NQ490_08010 | P80168 | + | 1679433 - 1679600 | 5337.32 |
| duf3842 family protein | NQ490_08015 | Not Available | + | 1679971 - 1680396 | 14478.8 |
| uridine kinase | NQ490_08020 | Not Available | + | 1680393 - 1680989 | 21894.5 |
| ecf transporter s component | NQ490_08025 | Not Available | + | 1681084 - 1681635 | 19214.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.