Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | NQ490_07930 | P19834 | - | 1660505 - 1661686 | 44132.7 |
| tyrosine-type recombinase/integrase | NQ490_07935 | Q9V1P5 | + | 1662019 - 1662765 | 28452.8 |
| site-specific integrase | NQ490_07940 | Not Available | + | 1663102 - 1663908 | 30898.9 |
| lpxtg cell wall anchor domain-containing protein | NQ490_07945 | Not Available | + | 1664651 - 1667116 | 87678.5 |
| 2-hydroxyacid dehydrogenase | NQ490_07950 | P44501 | + | 1667292 - 1668287 | 36029.4 |
| rida family protein | NQ490_07955 | Q7CP78 | + | 1668358 - 1668729 | 12873.5 |
| ribonuclease z | NQ490_07960 | B9KYQ3 | + | 1669111 - 1670016 | 31355.5 |
| nusg domain ii-containing protein | NQ490_07965 | Not Available | + | 1670013 - 1670363 | 12574.1 |
| gnat family n-acetyltransferase | NQ490_07970 | Not Available | + | 1670380 - 1670880 | 18830.0 |
| exonuclease sbccd subunit d | NQ490_07975 | Q2FH89 | + | 1670885 - 1672015 | 40578.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.