Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Subdoligranulum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Subdoligranulum |
| Species | Subdoligranulum variabile |
| Strain | BI-114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecum |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Subdoligranulum variabile BI-114
Accession NumberCP102293.1
Gene Summary
Adenine Count
685001 bp
Thymine Count
680645 bp
Guanine Count
942230 bp
Cytosine Count
937078 bp
Genome Length
3244954 bp
Protein-coding Genes
2930 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m24 family metallopeptidase | NQ490_07880 | Q8RY11 | - | 1646555 - 1648342 | 64625.5 |
| gtp-binding protein | NQ490_07885 | P29937 | + | 1648546 - 1649865 | 49376.7 |
| outer membrane insertion c- signal | NQ490_07890 | Not Available | + | 1650185 - 1651162 | 36841.7 |
| thioether cross-link-forming sciff peptide maturase | NQ490_07895 | P76134 | - | 1651382 - 1652836 | 53880.7 |
| six-cysteine ranthipeptide sciff | NQ490_07900 | Not Available | - | 1652919 - 1653065 | 5164.1 |
| hypothetical protein | NQ490_07905 | Not Available | - | 1653608 - 1654792 | 42267.4 |
| hypothetical protein | NQ490_07910 | Not Available | + | 1654946 - 1656721 | 65106.6 |
| sulfide/dihydroorotate dehydrogenase-like fad/nad-binding protein | NQ490_07915 | Q8U194 | + | 1656824 - 1657666 | 30293.9 |
| nadph-dependent glutamate synthase | NQ490_07920 | Q8U195 | + | 1657669 - 1659066 | 50150.5 |
| metallophosphoesterase | NQ490_07925 | O67153 | + | 1659151 - 1660272 | 41334.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.